Infectious disease epidemiology aims to better understand the changing dynamics of an outbreak over time. Could genomic data help estimates of disease prevalence and incidence? ➡️
This is so far one of the longest papers in the making, but alas, there is light! We collectively learned a lot along the way about how the different components of the population dynamic models influence the phylogenetic likelihood.
Estimating epidemic incidence and prevalence from genomic data #Ebola